For details of the methods, see here.
Note that introns are numbered from left to right along the sense strand of the gene (not from 5' to 3' in the gene).
| 1. | CBG01087.F.6 | in CBG01087 | (ortholog Y50D4A.4, unknown function) | tree | alignment |
| 2. | CBG02276.R.7 | in CBG02276 | (ortholog R05F9.12, carbohydrate metabolism) | tree | alignment |
| 3. | CBG02970.R.4 | in CBG02970 | (ortholog C09H10.3, complex I : NADH to ubiquinone) | tree | alignment |
| 4. | CBG03054.F.3 | in CBG03054 | (ortholog C14A4.13, protein amino acid phosphorylation) | tree | alignment |
| 5. | CBG03989.R.2 | in CBG03989 | (ortholog Y74C10AM.1, transport : ATP-binding) | tree | alignment |
| 6. | CBG03991.F.3 | in CBG03991 | (ortholog Y74C10AR.1, homolog of human initiation factor) | tree | alignment |
| 7. | CBG04120.R.2 | in CBG04120 | (ortholog Y71F9B.7, cell cycle; protein amino acid phosphorylation) | tree | alignment |
| 8. | CBG04332.R.8 | in CBG04332 | (ortholog F02E11.1, transport; ATP-binding) | tree | alignment |
| 9. | CBG05238.F.2 | in CBG05238 | (ortholog F09A5.1, transport; sugar-binding) | tree | alignment |
| 10. | CBG06975.R.1 | in CBG06975 | (ortholog T25D3.3, amino acid metabolism; proteolysis and peptidolysis) | tree | alignment |
| 11. | CBG08388.F.7 | in CBG08388 | (ortholog F01D4.1, metabolism) | tree | alignment |
| 12. | CBG08494.R.5 | in CBG08494 | (ortholog Y48G8AL.6, nonsense-mediated decay; RNA interference; genital morphogenesis) | tree | alignment |
| 13. | CBG09872.R.3 | in CBG09872 | (ortholog ZK1128.4, DNA repair; transcription regulation) | tree | alignment |
| 14. | CBG11248.R.2 | in CBG11248 | (ortholog F52E1.10, proton transport) | tree | alignment |
| 15. | CBG12264.R.1 | in CBG12264 | (ortholog ZK688.3, metabolism) | tree | alignment |
| 16. | CBG12289.F.6 | in CBG12289 | (ortholog ZK688.8, homolog of human N-acetylgalactosaminyltransferase) | tree | alignment |
| 17. | CBG12498.F.3 | in CBG12498 | (ortholog F43G9.9, homolog of yeast calponin) | tree | alignment |
| 18. | CBG12877.F.2 | in CBG12877, homolog of human NOGO-interacting mitochondrial protein | (ortholog TBLASTN hit) | tree | alignment |
| 19. | CBG13586.R.1 | in CBG13586 | (ortholog K08D12.1, ubiquitin-dependent protein degradation) | tree | alignment |
| 20. | CBG14784.R.4 | in CBG14784 | (ortholog R07E4.4, homolog of yeast nucleoside diphosphatase) | tree | alignment |
| 21. | CBG15267.F.3 | in CBG15267 | (ortholog T19C3.8, protein amino acid dephosphorylation) | tree | alignment |
| 22. | CBG15720.R.6 | in CBG15720 | (ortholog Y50D7A.6, homolog of human kinesin-like protein) | tree | alignment |
| 23. | CBG15756.R.5 | in CBG15756 | (ortholog Y37D8A.22, unknown function) | tree | alignment |
| 24. | CBG16436.R.2 | in CBG16436 | (ortholog F21D5.7, protein targeting) | tree | alignment |
| 25. | CBG16503.F.5 | in CBG16503 | (ortholog F11H8.1, protein modification; ubiquitin cycle) | tree | alignment |
| 26. | CBG17774.R.9 | in CBG17774 | (ortholog F18A12.8, proteolysis and peptidolysis) | tree | alignment |
| 27. | CBG17959.F.2 | in CBG17959 | (ortholog C35D10.10, electron transport) | tree | alignment |
| 28. | CBG18137.R.2 | in CBG18137 | (ortholog ZK1236.1, protein synthesis elongation) | tree | alignment |
| 29. | CBG18597.F.3 | in CBG18597 | (ortholog F28F8.2, metabolism; transport) | tree | alignment |
| 30. | CBG18947.R.1 | in CBG18947 | (ortholog W01A11.5, homolog of human carnitine palmitoyltransferase) | tree | alignment |
| 31. | CBG19441.F.6 | in CBG19441 | (ortholog H15N14.2, homolog of human vesicle-fusing ATPase) | tree | alignment |
| 32. | CBG19800.F.2 | in CBG19800 | (ortholog Y105E8B.5, nucleoside metabolism; purine salvage) | tree | alignment |
| 33. | CBG20408.F.3 | in CBG20408 | (ortholog F49D11.1, homolog of human pre-mRNA splicing factor PRP17) | tree | alignment |
| 34. | CBG21228.F.4 | in CBG21228 | (ortholog T08A11.2, homolog of human splicing factor 3B subunit 1) | tree | alignment |
| 35. | CBG21228.F.7 | in CBG21228 | (ortholog T08A11.2, homolog of human splicing factor 3B subunit 1) | tree | alignment |
| 36. | CBG21228.F.8 | in CBG21228 | (ortholog T08A11.2, homolog of human splicing factor 3B subunit 1) | tree | alignment |
| 37. | CBG22093.F.7 | in CBG22093 | (ortholog Y37E3.17, electron transport; transport) | tree | alignment |
| 38. | CBG22999.F.3 | in CBG22999 | (ortholog Y39E4B.1, electron transport; transport) | tree | alignment |
| 39. | CBG23047.R.2 | in CBG23047 | (ortholog Y75B8A.14, homolog of mouse ATP-binding protein) | tree | alignment |
| 40. | CBG23281.F.4 | in CBG23281 | (ortholog W05E10.4, trehalose metabolism) | tree | alignment |
| 41. | CBG23817.F.1 | in CBG23817 | (ortholog Y80D3A.9, unknown function) | tree | alignment |
| 42. | B0285.6.F.7 | in B0285.6, sodium transport | (ortholog CBG18085) | tree | alignment |
| 43. | B0432.4.F.3 | in B0432.4, transport | (ortholog CBG07018) | tree | alignment |
| 44. | C04G2.6.F.13 | in C04G2.6, homolog of human mitotic control protein | (ortholog CBG13499) | tree | alignment |
| 45. | C04G2.6.F.6 | in C04G2.6, homolog of human mitotic control protein | (ortholog CBG13499) | tree | alignment |
| 46. | C06E1.10.R.5 | in C06E1.10, homolog of Arabidopsis putative pre-mRNA splicing factor | (ortholog CBG15333) | tree | alignment |
| 47. | C25D7.7.R.5 | in C25D7.7, signal transduction | (ortholog CBG11577) | tree | alignment |
| 48. | C34B7.2.F.4 | in C34B7.2, unknown function | (ortholog CBG04077) | tree | alignment |
| 49. | D2024.6.R.1 | in D2024.6, actin cytoskeleton organization and biogenesis | (ortholog CBG05812) | tree | alignment |
| 50. | D2096.3.F.5 | in D2096.3, carbohydrate metabolism | (ortholog CBG18464) | tree | alignment |
| 51. | F02E11.1.F.1 | in F02E11.1, transport | (ortholog CBG04332) | tree | alignment |
| 52. | F10C1.7A.F.4 | in F10C1.7A, homolog of human lamin | (ortholog CBG02493) | tree | alignment |
| 53. | F10G8.6.F.1 | in F10G8.6, homolog of human nucleotide binding protein | (ortholog CBG03788 | tree | alignment |
| 54. | F16D3.1.F.5 | in F16D3.1, microtubule-based movement | (ortholog CBG04075) | tree | alignment |
| 55. | F20B6.2.F.2 | in F20B6.2, ATP biosynthesis; proton transport | (ortholog CBG14362) | tree | alignment |
| 56. | F29F11.1.R.2 | in F29F11.1, electron transport | (ortholog CBG09668) | tree | alignment |
| 57. | F32D1.5.R.1 | in F32D1.5, nucleotide metabolism | (ortholog CBG23625) | tree | alignment |
| 58. | F33H2.5.R.8 | in F33H2.5, DNA replication | (ortholog CBG19758) | tree | alignment |
| 59. | F36A4.7.F.8 | in F36A4.7, gastrulation; transcription from Pol II promoter | (ortholog CBG05355) | tree | alignment |
| 60. | F38E11.5.F.7 | in F38E11.5, homolog of yeast protein involved in endoplasmic-to-Golgi protein trafficking | (ortholog CBG21666) | tree | alignment |
| 61. | F43G9.5.F.1 | in F43G9.5, transport | (ortholog CBG12500) | tree | alignment |
| 62. | F49B2.5.F.6 | in F49B2.5, intracellular signaling cascade; protein amino acid phosphorylation | (ortholog CBG08738) | tree | alignment |
| 63. | F52E1.10.R.2 | in F52E1.10, proton transport | (ortholog CBG11248) | tree | alignment |
| 64. | F52H3.2.R.2 | in F52H3.2, electron transport | (ortholog CBG13376) | tree | alignment |
| 65. | F54C9.2.R.6 | in F54C9.2, homolog of yeast stress-seventy subfamily A | (ortholog CBG00564) | tree | alignment |
| 66. | F56F11.4A.F.2 | in F56F11.4A, protein degradation | (ortholog multiple) | tree | alignment |
| 67. | F56G4.5.F.3 | in F56G4.5, electron transport | (ortholog CBG08042) | tree | alignment |
| 68. | F57C2.5.R.1 | in F57C2.5, biosynthesis | (ortholog CBG20870) | tree | alignment |
| 69. | F57C2.5.R.2 | in F57C2.5, biosynthesis | (ortholog CBG20870) | tree | alignment |
| 70. | H17B01.1A.F.6 | in H17B01.1A, carbohydrate transport | (ortholog CBG07075) | tree | alignment |
| 71. | H27M09.1.F.7 | in H27M09.1, homolog of yeast DEAD box RNA helicase | (ortholog CBG12746) | tree | alignment |
| 72. | H27M09.1.F.8 | in H27M09.1, homolog of yeast DEAD box RNA helicase | (ortholog CBG12746) | tree | alignment |
| 73. | H43I07.2.F.2 | in H43I07.2, transcription | (ortholog CBG01436) | tree | alignment |
| 74. | K02A2.3.R.5 | in K02A2.3, amino acid transport | (ortholog CBG13060) | tree | alignment |
| 75. | K04D7.3.F.5 | in K04D7.3, aminobutyrate metabolism | (ortholog CBG03400) | tree | alignment |
| 76. | K05B2.3.R.6 | in K05B2.3, homolog of human lamin | (ortholog CBG14566) | tree | alignment |
| 77. | K08E3.1.F.3 | in K08E3.1, metabolism | (ortholog CBG18278) | tree | alignment |
| 78. | K08E3.1.F.5 | in K08E3.1, metabolism | (ortholog CBG18278) | tree | alignment |
| 79. | K10H10.1.F.3 | in K10H10.1, transport | (ortholog CBG00985) | tree | alignment |
| 80. | LLC1.1.R.3 | in LLC1.1, proteolysis and peptidolysis | (ortholog CBG21580) | tree | alignment |
| 81. | R07B7.1.R.5 | in R07B7.1, chloride transport | (ortholog CBG23365) | tree | alignment |
| 82. | R11E3.8.R.4 | in R11E3.8, homolog of yeast dipeptidyl aminopeptidase | (ortholog CBG11649) | tree | alignment |
| 83. | R13G10.1.R.2 | in R13G10.1, chromosome segregation | (ortholog CBG20143) | tree | alignment |
| 84. | R166.2.R.4 | in R166.2, homolog of human cleft lip and palate protein | (ortholog CBG03077) | tree | alignment |
| 85. | R74.1.R.3 | in R74.1, amino acid activation; protein biosynthesis | (ortholog CBG20159) | tree | alignment |
| 86. | T03F6.1.F.3 | in T03F6.1, metabolism | (ortholog CBG07035) | tree | alignment |
| 87. | T07A9.7.F.3 | in T07A9.7, G-protein coupled receptor protein signaling pathway | (ortholog CBG13491) | tree | alignment |
| 88. | T08G11.5.R.1 | in T08G11.5, ion transport | (ortholog CBG12389) | tree | alignment |
| 89. | T08G2.3.R.3 | in T08G2.3, electron transport | (ortholog CBG15946) | tree | alignment |
| 90. | T10B11.2.F.9 | in T10B11.2, protein kinase C activation | (ortholog CBG12724) | tree | alignment |
| 91. | T10F2.4.R.2 | in T10F2.4, homolog of human nuclear matrix protein | (ortholog CBG21324) | tree | alignment |
| 92. | T13H5.8.F.6 | in T13H5.8, homolog of human cisplatin resistance related protein | (ortholog CBG04750) | tree | alignment |
| 93. | T20B5.1.F.4 | in T20B5.1, homolog of human adapter-related protein complex subunit | (ortholog CBG16158) | tree | alignment |
| 94. | T23G5.2.R.4 | in T23G5.2, transport | (ortholog CBG10148) | tree | alignment |
| 95. | T26A5.3.F.5 | in T26A5.3, electron transport | (ortholog CBG19683) | tree | alignment |
| 96. | T26G10.1.R.1 | in T26G10.1, homolog of yeast protein required for rRNA processing | (ortholog CBG10097) | tree | alignment |
| 97. | T28F3.1A.R.2 | in T28F3.1A, homolog of human copine V protein | (ortholog CBG00380) | tree | alignment |
| 98. | W02D9.1.R.3 | in W02D9.1, homolog of human DNA primase large subunit | (ortholog CBG08720) | tree | alignment |
| 99. | W05E10.4.R.5 | in W05E10.4, trehalose metabolism | (ortholog CBG23281) | tree | alignment |
| 100. | W05E10.4.R.8 | in W05E10.4, trehalose metabolism | (ortholog CBG23281) | tree | alignment |
| 101. | W06D4.6.F.13 | in W06D4.6, homolog of human DNA repair protein RAD54 | (ortholog CBG12435) | tree | alignment |
| 102. | W06H3.1.F.4 | in W06H3.1, homolog of human mitochondrial inner membrane protein | (ortholog CBG24360) | tree | alignment |
| 103. | Y102A5A.1.F.9 | in Y102A5A.1, homolog of yeast protein that is a member of the TIP120 family | (ortholog CBG23895) | tree | alignment |
| 104. | Y22D7AL.5.F.2 | in Y22D7AL.5, homolog of human heat shock protein | (ortholog CBG11701) | tree | alignment |
| 105. | Y22D7AL.5.F.4 | in Y22D7AL.5, homolog of human heat shock protein | (ortholog CBG11701) | tree | alignment |
| 106. | Y25C1A.5.F.3 | in Y25C1A.5, homolog of yeast protein involved in endoplasmic-to-Golgi protein trafficking | (ortholog CBG19635) | tree | alignment |
| 107. | Y25C1A.5.F.5 | in Y25C1A.5, homolog of yeast protein involved in endoplasmic-to-Golgi protein trafficking | (ortholog CBG19635) | tree | alignment |
| 108 | Y37E11B.5.R.3 | in Y37E11B.5, unknown function | (ortholog CBG08326) | tree | alignment |
| 109. | Y38F2AR.2.F.1 | in Y38F2AR.2, unknown function | (ortholog CBG16815) | tree | alignment |
| 110. | Y42G9A.6.R.6 | in Y42G9A.6, transport | (ortholog CBG21117) | tree | alignment |
| 111. | Y43H11AL.3.R.10 | in Y43H11AL.3, homolog of yeast sister chromatid cohesion protein | (ortholog CBG07027) | tree | alignment |
| 112. | Y48G8AL.6.F.4 | in Y48G8AL.6, RNA interference; nonsense-mediated decay; genital morphogenesis | (ortholog CBG08494) | tree | alignment |
| 113. | Y50D4A.4.R.2 | in Y50D4A.4, unknown function | (ortholog CBG01087) | tree | alignment |
| 114. | Y50D7A.6.F.4 | in Y50D7A.6, homolog of human kinesin-like protein | (ortholog CBG15720) | tree | alignment |
| 115. | Y55F3AR.3.R.6 | in Y55F3AR.3, homolog of human heat shock protein | (ortholog CBG08425) | tree | alignment |
| 116. | Y59A8B.6.F.11 | in Y59A8B.6, RNA processing: homolog of yeast RNA splicing factor | (ortholog CBG05596) | tree | alignment |
| 117. | Y65B4A.6.R.2 | in Y65B4A.6, homolog of human initiation factor | (ortholog CBG05145) | tree | alignment |
| 118. | Y74C10AM.1.R.2 | in Y74C10AM.1, transport | (ortholog CBG03989) | tree | alignment |
| 119. | ZC404.9.R.2 | in ZC404.9, protein amino acid phosphorylation | (ortholog CBG19019) | tree | alignment |
| 120. | ZC410.3.R.1 | in ZC410.3, N-linked glycosylation | (ortholog CBG21758) | tree | alignment |
| 121. | ZK1320.6.F.1 | in ZK1320.6, protein transport; signal transduction | (ortholog CBG01059) | tree | alignment |
| 122. | ZK816.5.R.3 | in ZK816.5, metabolism | (ortholog CBG14194) | tree | alignment |
