Statistical analysis:
Size of sister regions in the real genome compared with 1,000 simulations
in which the gene order was suffled:
sm
|
3
|
4
|
5
|
6
|
7
|
8
|
9
|
10
|
>= 6
|
Real genome
|
179
|
50
|
35
|
17
|
10
|
13
|
7
|
1
|
108
|
Mean Randomized genome
|
91.59
|
5.35
|
0.82
|
0.20
|
0.03
|
0.01
|
0.00
|
0
|
0.24
|
std. dev. Randomized genome
|
18.62
|
2.53
|
0.90
|
0.45
|
0.16
|
0.06
|
0.09
|
0
|
0.71
|
sm : Number of duplicated genes shared between sister regions.
Size of sister regions in the reconstructed pseudo ancestral genome
with 1,000 simulations in which the gene order was suffled:
sm
|
3
|
4
|
5
|
6
|
7
|
8
|
9
|
10
|
>= 7
|
Pseudo ancestral genome
|
197
|
56
|
28
|
11
|
19
|
11
|
6 |
6
|
68
|
Mean Randomized pseudo genome
|
113.46
|
20.93
|
4.08
|
0.96
|
0.43
|
0.15
|
0.10
|
0
|
0.68
|
std. dev. Randomized pseudo genome
|
9.60
|
5.29
|
2.40
|
0.93
|
0.67
|
0.36
|
0.30
|
0
|
0.81
|
sm : Number of duplicated genes shared between sister regions.
Analysis of the degree of overlap between adjacent duplicated
regions in the reconstructed pseudo ancestral genome:
Distribution of the overall overlaps between adjacent regions randomly
positioned across the genome (10,000 replicates)